X3D Model Documentation: MedicalMetadata.x3d

  1  <?xml version="1.0" encoding="UTF-8"?>
  2  <!DOCTYPE X3D PUBLIC "ISO//Web3D//DTD X3D 3.1//EN" "https://www.web3d.org/specifications/x3d-3.1.dtd">
  3  <X3D profile='Immersive' version='3.1 xmlns:xsd='http://www.w3.org/2001/XMLSchema-instance' xsd:noNamespaceSchemaLocation='https://www.web3d.org/specifications/x3d-3.1.xsd'>
  4       <head>
  5            <meta name='titlecontent='MedicalMetadata.x3d'/>
  6            <meta name='descriptioncontent='MetadataSets demonstrating sample medical ontology integration with X3D scene graph.'/>
  7            <meta name='creatorcontent='Nick Polys and Andrew Ray'/>
  8            <meta name='createdcontent='1 November 2007'/>
  9            <meta name='modifiedcontent='20 October 2019'/>
 10            <meta name='referencecontent='https://www.web3d.org/x3d/workgroups/medical'/>
 11            <meta name='subjectcontent='medical metadata'/>
 12            <meta name=' warning content=' incomplete development '/>
 13            <meta name='identifiercontent='https://www.web3d.org/x3d/content/examples/Basic/Medical/MedicalMetadata.x3d'/>
 14            <meta name='generatorcontent='FluxStudio'/>
 15            <meta name='generatorcontent='(VT application for metadata generation)'/>
 16            <meta name='generatorcontent='X3D-Edit 3.3, https://savage.nps.edu/X3D-Edit'/>
 17            <meta name='licensecontent='../license.html'/>
 18       </head>
<!--

<!-- -->

<!-- to top Index for DEF nodes: airway, airway_Coord, airway_Geo, Body, BodyParts, BodyShape, Colon, colon, ColonParts, ColonShape, DigestiveSystem, GeoSculptedSurface1, GeoSculptedSurface2, Liver, liver, LiverParts, LiverShape, m123456, m123654, m7334, Red, RespiratoryParts, RespiratoryShape, RespiratorySystem, Shiny_Rust, SkinSwitch, White

Index for Viewpoint node: Viewpoint_1
-->
 19       <Scene>
 20            <WorldInfo title='MedicalMetadata.x3d'/>
 21            <Transform DEF='Body'>
 22                 <Transform DEF='BodyShape'>
 23                      <Switch DEF='SkinSwitchwhichChoice='0'>
 24                           <Inline   url=' "BodySkinIndexedFaceSetNIST.x3d" "https://www.web3d.org/x3d/content/examples/Basic/Medical/BodySkinIndexedFaceSetNIST.x3d" "BodySkinIndexedFaceSetNIST.wrl" "https://www.web3d.org/x3d/content/examples/Basic/Medical/BodySkinIndexedFaceSetNIST.wrl" '/>
 25                           <Group/>
 26                      </Switch>
 27                 </Transform>
 28                 <Group DEF='BodyParts'>
 29                      <Group DEF='RespiratorySystem'>
 30                           <MetadataSet DEF='m7334name='Upper_lobe_of_lungreference='FMA'>
 31                                <MetadataString containerField='valuename='has inherent 3-D shapevalue='"true"'/>
 32                                <MetadataSet containerField='valuename='regional partreference='FMA'>
 33                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 34                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 35                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 36                                </MetadataSet>
 37                                <MetadataString containerField='valuename='regional part ofvalue='"blank"'/>
 38                                <MetadataSet containerField='valuename='constitutional partreference='FMA'>
 39                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Parenchyma_of_lobe_of_lung"'/>
 40                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Lobar_bronchial_tree"'/>
 41                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Pleura_of_lobe_of_lung"'/>
 42                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Neural_network_of_lobe_of_lung"'/>
 43                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Vasculature_of_lobe_of_lung"'/>
 44                                </MetadataSet>
 45                                <MetadataString containerField='valuename='dimensionvalue='"3-dimension"'/>
 46                                <MetadataString containerField='valuename='has dimensionvalue='"true"'/>
 47                                <MetadataString containerField='valuename='has boundaryvalue='"true"'/>
 48                                <MetadataInteger containerField='valuename='FMAIDvalue='7334'/>
 49                                <MetadataString containerField='valuename='Preferred namevalue='"Upper_lobe_of_lung"'/>
 50                                <MetadataSet containerField='valuename='Synonymreference='FMA'>
 51                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Lobus_superior"'/>
 52                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Superior_lobe_of_lung"'/>
 53                                </MetadataSet>
 54                                <MetadataSet containerField='valuename='partreference='FMA'>
 55                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Parenchyma_of_lobe_of_lung"'/>
 56                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Lobar_bronchial_tree"'/>
 57                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Pleura_of_lobe_of_lung"'/>
 58                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 59                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 60                                     <MetadataString containerField='valuename='SetNamereference='FMAvalue='"Bronchopulmonary_segment"'/>
 61                                </MetadataSet>
 62                                <MetadataString containerField='valuename='part ofvalue='"Lobular_organ"'/>
 63                                <MetadataString containerField='valuename='Non-English equivalentvalue='"Lobus_superior_pulmonis"'/>
 64                                <MetadataString containerField='valuename='constitutional part ofvalue='"blank"'/>
 65                           </MetadataSet>
 66                           <Transform DEF='RespiratoryShaperotation='-.995 .102 0 3.142scale='3.96357 4.0229 6.98914translation='-9.65146 62.0249 -3.89403'>
 67                                <Shape DEF='airway'>
 68                                     <Appearance>
 69                                          <Material DEF='WhiteambientIntensity='0.200diffuseColor='1 1 1shininess='0.200'/>
 70                                     </Appearance>
 71                                     <IndexedFaceSet DEF='airway_GeocreaseAngle='0.524coordIndex='0 1 2 -1 0 2 3 -1 0 3 4 -1 0 4 5 -1 0 5 6 -1 0 6 7 -1 0 7 8 -1 0 8 9 -1 0 9 10 -1 0 10 11 -1 0 11 12 -1 0 12 13 -1 0 13 14 -1 0 14 15 -1 3 2 16 -1 3 16 17 -1 2 1 18 -1 2 18 16 -1 1 0 19 -1 1 19 18 -1 15 20 21 -1 15 21 22 -1 15 22 19 -1 15 19 0 -1 14 23 24 -1 14 24 20 -1 14 20 15 -1 26 23 14 -1 26 14 13 -1 26 13 25 -1 28 25 13 -1 28 13 12 -1 28 12 27 -1 30 27 12 -1 30 12 11 -1 30 11 29 -1 33 29 11 -1 33 11 10 -1 33 10 31 -1 33 31 32 -1 10 9 34 -1 10 34 35 -1 10 35 36 -1 10 36 37 -1 10 37 38 -1 10 38 39 -1 10 39 40 -1 10 40 31 -1 9 8 41 -1 9 41 42 -1 9 42 43 -1 9 43 44 -1 9 44 45 -1 9 45 46 -1 9 46 47 -1 9 47 34 -1 7 48 49 -1 7 49 50 -1 7 50 41 -1 7 41 8 -1 51 52 48 -1 51 48 7 -1 51 7 6 -1 51 6 53 -1 6 5 54 -1 6 54 53 -1 5 4 55 -1 5 55 54 -1 4 3 17 -1 4 17 55 -1 56 57 58 -1 56 58 59 -1 60 58 57 -1 60 57 61 -1 62 63 64 -1 65 63 62 -1 65 62 66 -1 67 68 69 -1 63 68 67 -1 63 67 64 -1 70 71 72 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173                                          </IndexedFaceSet>
174                                     </Shape>
175                                </Transform>
176                           </Group>
177                      </Group>
178                 </Group>
179            </Transform>
180            <Viewpoint position='0 40 145'/>
181       </Scene>
182  </X3D>
<!--

<!-- -->

<!-- to top Index for DEF nodes: airway, airway_Coord, airway_Geo, Body, BodyParts, BodyShape, Colon, colon, ColonParts, ColonShape, DigestiveSystem, GeoSculptedSurface1, GeoSculptedSurface2, Liver, liver, LiverParts, LiverShape, m123456, m123654, m7334, Red, RespiratoryParts, RespiratoryShape, RespiratorySystem, Shiny_Rust, SkinSwitch, White

Index for Viewpoint node: Viewpoint_1
-->
X3D Tooltips element index: Appearance, Coordinate, Group, head, IndexedFaceSet, Inline, Material, meta, MetadataInteger, MetadataSet, MetadataString, Scene, Shape, Switch, Transform, Viewpoint, WorldInfo, X3D, accessType and type, XML data types, field types

-->
<!-- Online at
https://www.web3d.org/x3d/content/examples/Basic/Medical/MedicalMetadataIndex.html -->
<!-- Version control at
https://sourceforge.net/p/x3d/code/HEAD/tree/www.web3d.org/x3d/content/examples/Basic/Medical/MedicalMetadata.x3d -->

<!-- Color legend: X3D terminology <X3dNode DEF='idName' field='value'/> matches XML terminology <XmlElement DEF='idName' attribute='value'/>
(Light-blue background: event-based behavior node or statement) (Grey background inside box: inserted documentation) (Magenta background: X3D Extensibility)
-->

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